Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMHQIPTPTMSQVIMLNDSITTAEFMVSALRDFFDKPLEEAQKLMLSIHRDGDGVCGVYPYEIAIYKAVCVRDKA-RARFPLRLMVQEVK
3G1B Chain:B ((5-84))
---------SLYRVLILNDDYTPAEFVVYVLERFFNKSREDATRIMLHVHQNGVGVCGVYTYEVAETKVAQVIDSARRHQHPLQCTMEKD-
General information:
TITO was launched using:
RESULT:
Template:
3G1B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54508 for 558 contacts (-97.7/contact) +
2D Compatibility (PS) -8958 + (NN) -7952 + (LL) 812
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -79956.0 ( -143.29 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3G1B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G1B-query.scw
PDB file :
Tito_Scwrl_3G1B.pdb
: