Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------MKHDAYEIILSWF---------ITPLTAILGRFAEFFLYTLHAQLVFNSAVALAFMLFAYRSLKEQNFFSASALLEALWFVGFFALFNYALKNPSRFYELFQNAIFIAPNMIT----QSLSQSLSNFSNHALSLDFIFNHGFYALSF--------ISDLSHNEM----SVWLFLSILQALFLSVLFAIIILVYLEAHV------WCSLGALFL---AFGFFKTWRSVVVICLKKCFALGFYKPFLLLVGFLNVSVT----KALMDASMQEKQDLSLLLV-----VALFLCCVFIIGVPFFINALFRVQNSLKET--------YKLATNLSANLTQSAFQSLQHATTSPAPSHISSSASQSVSKEKETHSPTFKVETTQLDVK--IPNFKQKKVKKDTIDTKNEI------------------------------------------ |
| 4HE8 Chain:G ((1-467)) | MVVLAVLLPVVFGALLLLGLPRALGVLGAGLSFLLNLYLFLTHPGGVAHAFQAPLLPGAGVYWAFGLDGLSALFFLTIALTVFLGALVARVEGRFLGLALLMEGLLLGLFAAR------DLLVFYVFFEAALIPALLMLYLYGGEGRTRALYTFVLFTLVGSLPMLAAVLGARLLSGSPTFLLEDLLAHPLQEEAAFWVFLGFALAFAIKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAFAAKDFKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYRGLAQSAPGLAALALILFLAMVGLPGLSGFPGEFLTLLGAYKASPWLAALAFLSVIASAAYALTAFQKTFWEEGGSGVKDLAGAEWGFALLSVLALLLMGVFPGYFARGLHPLAEAFAKLLGG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274663 for 2972 contacts (-92.4/contact) +
2D Compatibility (PS) -35611 + (NN) -15026 + (LL) 528
1D Compatibility (HY) -13200 + (ID) 2650
Total energy: -340622.0 ( -114.61 by residue)
QMean score : 0.192
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