Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEKPFNSEQMAFLEELLSHQEKHLESKLSGFSVNDLDMQSVFRLERNRLKIAYRLLGLMSFIALVLAIVLISILPLQKTEHHFVDFLNQDKHYAIIQRADKSISSNEALARSLIGAYVLNRESINRIDDKSRYELVRLQSSSKVWQRFEDLIKAQNSIYV--QSHLEREVHIVNIAIYQQDNNPIASVSIAAKLLNENK-LVYEKRYKIVLSYLFDTP-DFDYASMPKNPTGFKITRYSITEIAPTNRND |
2BHM Chain:A ((97-235)) | --------------------------------------------------------------------------------------------------------SYDTVMDKYWLSQYVIARETYDWYTLQKDYETVGMLSSPSEGQSYASQFQGDKALDKQYGSNVRTSVTIVSIVPNG---KGIGTVRFAKTTKR---GDGETTHWIATIGYQYVNPSLMSESARLTNPLGFNVTSYRVDPEM------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2BHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -78772 for 1009 contacts (-78.1/contact) +
2D Compatibility (PS) -14094 + (NN) -4122 + (LL) 9476
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -93712.0 ( -92.88 by residue)
QMean score : 0.401
|
|
|