Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRMLAEFEKIQAILMAFPHEFGDWAYCIEEARESFLHIIQTIAKHAKVLVCVHTNDTIGYETL----------KNLPGVEIARIDTNDTWARDFGAISVENH----GVLECLDFGFNGWGLKYP-SNLDNQVNFKLKHLGFLKHPLKTMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDENDEHYTALKKMQEELKTFKKLDGTPYKLIPLEIPKAVYNENQQRLPATYVNFLLCNNALIVPTYNDPNDTLILETLRQHTP-LEVIGVDCNTLIKQHGSLHCVTMQLY |
| 1XKN Chain:A ((5-345)) | TYFMPPEWAPHASTWLSWPHKLESWPGKFEPVPAVFAELAYQLSRSETVNINVLDDAMEA-QARELLKERDPEGKYAERIVFHRIPTNDAWCRDHGPNYVIRTQDGRRDKVIMNWEYNAWGGKYEPYDDDNAVPERVAKA--QGLPMVSTGMVLEGGAIDVNGAGLLLTTTACLLNPNRNPSLGKAEIEAQLRRYLGIEKVLWLGDG-IAGDDTDGHVDDMARFVNENTVVIAVEEDPEDENYKPLRENYELLKTMTGLDGKPLNIVKLPMPEPVYY-DGERLPASYANFYIANTVVLVPTYRCPRDQQAIDILQQCFPKREVVGIDCSDLIWGLGAIHCVTHEEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192546 for 2905 contacts (-66.3/contact) +
2D Compatibility (PS) -35561 + (NN) -17477 + (LL) 248
1D Compatibility (HY) -19600 + (ID) 5850
Total energy: -270786.0 ( -93.21 by residue)
QMean score : 0.447
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