Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIG-CQLGI--DYQKKAVEYMAK--RVPNMELFVFCEDLKFTQNLDLGY---PFM-DMTT-----RDKDEEAYWDMLLMQSCKHGII-A-NSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA |
| 2HHC Chain:A ((126-300)) | ----------------------------------------------------------------------------------------------------------IVCDACL-MWRCSEEAERLIFRNIKLRSEIRARI-----D---ALYEEHFSGHSIIGVHVRH-------WADSELALHQVCMAIRKAKALSYPKPVKVFLCTDSAQVLDQVSGLFPDVFAVPK---SAEMGIEGGASALIDMYLLARCATVIRFPPTSAFTRYARLLVPRIIEFDNPGHLTMIDNP----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50347 for 878 contacts (-57.3/contact) +
2D Compatibility (PS) -14424 + (NN) -1767 + (LL) 10676
1D Compatibility (HY) -7600 + (ID) 850
Total energy: -64312.0 ( -73.25 by residue)
QMean score : 0.267
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