Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFKKGVILDAKSVGLKALEVLKEVADFDFYEVTSPNQIVERSIEAEI--MVLNKVVITQEVLSQLPKLKLICITATGTDNVDIKSAKALGIEVKNVSAYSTESVAQHTLACALSLLGRINDYDRYCKSGEYSQSDIFTHISDIKMGL--IKGGQWGVIGLGNIGKRVAKLAQAFGAKVVYFSP--KDKKEE---YERL-SLEELLKTSGIISIHAPLNESTRDLIALKELQSLKDGAILINVGRGGIVNEKDLALILETKDLYYAS-DVFVKEPFEKDHAFLNPKIQNKLLLTPHIAWAYSDSLKTLVEKTKENIQDFLASQK |
| 4LCJ Chain:H ((25-314)) | --------LLDGRDCTVE-MPILKDLATVAFCDAQSTQEIHEKVLNEAVGAMMYHTITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTICHILNLYRRNTWLYQALREGTRVQS--VEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAFGFSVIFYDPYLQDGIERSLGVQRVYTLQDLLYQSDCVSLHCNLNEHNHHLINDFTIKQMRQGAFLVNAARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFAQGPL--KDAPNLICTPHTAW-YSEQASLEMREAAATEIRRAITGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161789 for 2134 contacts (-75.8/contact) +
2D Compatibility (PS) -29829 + (NN) -7455 + (LL) 800
1D Compatibility (HY) -21600 + (ID) 4850
Total energy: -224723.0 ( -105.31 by residue)
QMean score : 0.572
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