Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKIVLVAIALLISGCASYKITPEHVTSYNNGIQVMTSTQARSKVQLEIAQSKLK-GLNESPLVLYVAAQVLEGKPVVFSRKAISVSINQTNLPVLSLRQVMKSSFDFEGILQSFNISVPTAPIDNINMITPPMFYYGQGSFLAYNGMMYGGMGMYGPGFGMMMMDDVEEQEVMQESRQALKILAINYLKKNTLNVENKAKGGFVVVDTKNLKTPGVVVVKVFLEDEIHTFKIDISKM |
1F93 Chain:H ((5-30)) | -----------------------------------------LSQLQTELLAALLESGLSKEALIQAL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F93.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2281 for 105 contacts (21.7/contact) +
2D Compatibility (PS) -2694 + (NN) -806 + (LL) 15548
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 12379.0 ( 117.90 by residue)
QMean score : 0.350
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