Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEW---QDCLGMSYSELVEHVFELLNL-EIPKNLLASALKR-YENFDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKKMGLNIAKIKVVTNSNDVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH---EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLK---NSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 1VB3 Chain:A ((1-427)) | MKLYNLKDHN-EQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEIDEMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFA-F-----PAPVANVESDVGCLELFHGPTLAFKDFGGRFMAQMLTHIAGD--KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTL-GGNIETVAIDGDFDACQALVKQAFDDEELKVA-----LGLNSANSINISRLLAQICYYFEAVAQLPQET----RNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVNDTVPRFLHDGQWSPK--ATQATLSNAMDVSQPNNWPRVEELFRR-------------KI--------W-QLKE-LGYAAVDDETTQQTMRELK-ELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGETLDLPKELAERADLPLLSHNLPADF-AALRKLMMNHQ----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -176912 for 3923 contacts (-45.1/contact) +
2D Compatibility (PS) -44677 + (NN) -19504 + (LL) 5608
1D Compatibility (HY) -24000 + (ID) 5800
Total energy: -265285.0 ( -67.62 by residue)
QMean score : 0.453
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