Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMNVESFNLDHTKVKAPYVRIADRKKGVNGDLIVKYDVRFKQPNRDHMDMPSLHSLEHLVAEIIRNHANYVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVLKAKEVPASNEKQCGWAANHTLEGAQNLARAFLDKRAEWSEVGV
1J6X Chain:A ((1-151))
MKMNVESFNLDHTKVKAPYVRIADRKKGVNGDLIVKYDVRFKQPNRDHMDMPSLHSLEHLVAEIIRNHANYVVDWSPMGCQTGFYLTVLNHDNYTEILEVLEKTMQDVLKAKEVPASNEKQCGWAANHTLEGAQNLARAFLDKRAEWSEVG-
General information:
TITO was launched using:
RESULT:
Template:
1J6X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67120 for 1092 contacts (-61.5/contact) +
2D Compatibility (PS) -15871 + (NN) -7057 + (LL) 192
1D Compatibility (HY) -20800 + (ID) 7550
Total energy: -118206.0 ( -108.25 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1J6X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J6X-query.scw
PDB file :
Tito_Scwrl_1J6X.pdb
: