Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLISTIQNALNNL-------TTPIDVLTITANGEPTLYPH-LLELIQSIKPFLK-----GVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILSFSQI---YQGQLVAEVLLIKGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL-PKRST--AQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF |
| 3RFA Chain:A ((114-349)) | --------------------RATLCVSSQ-VGCALECKFCSTAQQGF----NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDD-FGFGLSKRRVTLSTSGVVPALDKLGDM--IDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCK-INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106091 for 1679 contacts (-63.2/contact) +
2D Compatibility (PS) -23230 + (NN) -11863 + (LL) 7472
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -142562.0 ( -84.91 by residue)
QMean score : 0.480
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