Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKLAFSLLFTGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRTEVNKRLEAMKEEERQKYKADFKKAMDKNLASLSQEDRNKRKKEILEVIANKKKTMTMKEYREEGLDLHDCACEGPFHDHEKKGQKGKKPSHHKH
2XRH Chain:A ((3-98))
---------------DPFTMAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAVKEALKKGN----MEDMD-DDFGLRS-------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XRH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 17089 for 597 contacts (28.6/contact) +
2D Compatibility (PS) -10355 + (NN) -5656 + (LL) 2244
1D Compatibility (HY) -4000 + (ID) 1250
Total energy: -1928.0 ( -3.23 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2XRH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XRH-query.scw
PDB file :
Tito_Scwrl_2XRH.pdb
: