Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METLHNALLKWYEEFGRKDLPFRN-----LKGINAPYEVYISEVMSQQTQISTVIERFYPPFLKAFPTLKDLANAPLEEVLLLWRGLGYYSRAKNLKKSAEICVKEHHSQLPNDYQSLLK-LPGIGAYTANAILCFGFREKSACVDANVKRVLLRL--FGLDPN--IHAKDLQIKANDFLNLNESFNHNQALIDLGALICSP-KPKCAICPFNPYCLGKNHLERHTLKKKQEIIQEERYLGVVIQNNQIALEKIEQKLYLGMHHFPNLKENLEFKLPFLGTIKHSHTKFKLNLNLYLATTKDLKNPIRFYSLKDLETLPISSMTLKILNFLKQKNLFGG |
| 3N5N Chain:Y ((15-239)) | VTAFRGSLLSWYDQE-KRDLPWRRRAEDEMDLDRRAYAVWVSEVMLQQTQVATVIN-YYTGWMQKWPTLQDLASASLEEVNQLWAGLGYYSRGRRLQEGARKVVEELGGHMPRTAETLQQLLPGVGRYTAGAIASIAFGQATGVVDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMELGATVCTPQRPLCSQCPVESLCRARQRVEQEQLLASGSLSVEECAPNTGQCHLCLPPSEPWDQTLGVVN---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3N5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130967 for 1690 contacts (-77.5/contact) +
2D Compatibility (PS) -22803 + (NN) -13661 + (LL) 6260
1D Compatibility (HY) -19600 + (ID) 4300
Total energy: -185071.0 ( -109.51 by residue)
QMean score : 0.437
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