Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKKMIGLVAVLSVLLARDNPFEPEINSKNLQGGFSGIYDDYLKEIHVDLPTSARI-LKKITLTYQDIDGSIHSKVVGIDKSIDWHYPLKLSQHTLNQDAFEKRYQIQDFDFLMANNTMILRSPYKILRSFVLVNPYRIVLDTQKGPLDIYQNMDLNQKFFSHIKVGTHKDYYRITLILDGKYRYLLEEKNGAYELKLK |
1NTM Chain:I ((1-57)) | -----------MLSVAARSGPFAPVLSATS--RGVAGALRPLVQAAVPATSESPVLDLKRSVLCRESLRG--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9910 for 232 contacts (42.7/contact) +
2D Compatibility (PS) -5205 + (NN) 4627 + (LL) 11120
1D Compatibility (HY) -1600 + (ID) 600
Total energy: 18252.0 ( 78.67 by residue)
QMean score : 0.013
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