Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEKIQKEW--LSNIQKDLLSGFVVGLSVIPETAGFAIMV--GLDVGVAFYTTFYMAFVLSLFGARKAMISAAAGSVALILVGVVKNYGLEYAGVATLMAGILQILL----GYLKIGNLLKFIPQSVMYGF--VNALGILLLTEQFKFLQNQNLGVFVLLA-------IGILIIYLFPLITKKIP-----SNLICI------LAVSAIALIFDTHAPNLGSIEQGVSGFHFIIIPKNLDFKMVLGLLPYALSLALVGTIESLLTAKTLDVILKDGVSDKNKETKAQGLGNIISGL-----------LGGMTGCALVGQSIINAKSGAKTRL----STFFAGFSLMVLILVFNEYVVKIPIVAVVAVMVIISFTTFNFQSIMNIKTIKLYDTLNMLLVVAVVLYTHNLAIGVVVGVLINALWIKFKGMG |
| 4XGC Chain:E ((1-458)) | -MEAICSSLEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNA-----------------IECYTTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRVEDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQIYMRIESLELPYYAKFLLIAAFLASHNAAKQDKRLFSTTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGL---EFVLQIGKVVGFNVRQYLCD----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -328515 for 2546 contacts (-129.0/contact) +
2D Compatibility (PS) -36659 + (NN) 1535 + (LL) 2016
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -376073.0 ( -147.71 by residue)
QMean score : 0.206
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