Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKLVIGSRGSELALWQANHIKERLKKECS-MESEIRIVKTTGDKILDAPLNKIGGKGLFTKELEELLLKGAIDLAVHSLKDVPVVFEKGLDLACITKRADVRDTFL-SVKF--PDLMSLPKGAKVGTTSLRRSMQIKFKRKDLDTESLRGNVQTRLKKL-ECGEFDAIILAEAGLCRLNVQGAKYRKAFSVKEMIPSMGQGALGVEMLKNHKHFITLQK-LNNEESAFCCHLEREFIKGLNGGCQIPIGVHANLMGDEVKIRAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEILEKAQLF |
3ECR Chain:B ((22-274)) | -RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAM-------------KIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHN-RVGQILHPEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE--CSVPVAVHTAMKDGQLYLTGGVWSLDGSDSIQETMQATIHPQLVGITARNIPRGPQLAAQNLGISLAN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ECR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94431 for 1851 contacts (-51.0/contact) +
2D Compatibility (PS) -24952 + (NN) -11196 + (LL) 396
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -154533.0 ( -83.49 by residue)
QMean score : 0.405
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