Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKFASVLVQLKTLALEKIERKLESKRLELQQNEREVLDKQAQLSAFKNPELGGMSLFLQTQQLKSALRMEIEYYQQEGENLTKDLKILEKDYLLANQELEKAKIILEKEKQKEKEILEKKEQALLDENAMILHWQKGGLHA
2L9Q Chain:A ((1-109))
----MSDAGRKGFGEKASEALKPDSQKSYAEQGKEYITDKADKVAGKVQPE-----------DNKGVFQGVHDSAEKGKDNAEGQ----------GESLADQARDYMGAAKSKLNDAVEYVSGRV--------HGEEDPTKK
General information:
TITO was launched using:
RESULT:
Template:
2L9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 35827 for 465 contacts (77.0/contact) +
2D Compatibility (PS) -12010 + (NN) -7093 + (LL) 3268
1D Compatibility (HY) 6400 + (ID) 750
Total energy: 25642.0 ( 55.14 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_2L9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L9Q-query.scw
PDB file :
Tito_Scwrl_2L9Q.pdb
: