Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDR-DKAPHLLLLAGIQGDEPGGFNATNLFLMHYS----VLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKN---DPEYPTIQEIKSLIAK------PSVDAVLHLHDGGGYY-RPVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFY-AINQKKSAFANEASKELPLESRV----FYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKISSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
| 1YW6 Chain:A ((39-291)) | ---------------------------LELTPLTPPQGALVISAGIHGNETAPVEMLDALLGAISHGEIPLRWRLL-VILGNPPALKQGKR---SDMNRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGVL---P----QR---DI------P---WDEKFLTWLGAAGLEAL-------VFH-------QEPGGTFTHFSARHFGALACTLELGKAL------LRQFAVTASAIAALLSGESVGIVR----TPPLRYRVV---SQITRHSPSFEMHMAS--DTLNFMPFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS--------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YW6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61233 for 1656 contacts (-37.0/contact) +
2D Compatibility (PS) -22977 + (NN) -1452 + (LL) 13176
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -80986.0 ( -48.90 by residue)
QMean score : 0.335
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