Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMADILSQEEIDALLEVVDENVDIQNVQKKDIIPQRSVTLYDFKRPNRVSKEQLRSFRSIHDKMARNLSSQVSSIMRSIVEIQLHSVDQMTYGEFLMSLPSPTSFNVFSM-KPMGGTGVLEINPSIAFPMIDRLLGGKGSAYDQNREFSDIELNLLDTILRQVMQILKEVWSPVVEMYPTIDAKESSANVVQIVAQNEISIMVVLEIIIGHSRGMMNICYPVISIESILSKMGSRDFMLSETNSKKSRNKELQALLSGVSVDMMVFLGAVELSLKEMLDLDVGDTIRLNKVANDEVSVYVHKKKRYLASVGFQGYRKTIQIKEVVYSEKERTKEILEMLEEQRRGKVGDIMKIEEE
1SQU Chain:A ((3-106))--------------------------------------------------------ARIVNALIGSVYETIRDVLGIEPKTGKPSTVS----H---IEIPHSLVTVIGITGGIEGSLIYSFSSETALKVVSAMMGGMEY-----NQLDELALSAIGELGNMTAGKLAMKLEHLGKHVDITPPTVVSGRDLKIKSFGVILKLPISVFSEEDFDLHLSVK-----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -37345 for 618 contacts (-60.4/contact) +
2D Compatibility (PS) -11119 + (NN) -5028 + (LL) 17232
1D Compatibility (HY) -5200 + (ID) 450
Total energy: -41910.0 ( -67.82 by residue)
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_1SQU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SQU-query.scw
PDB file : Tito_Scwrl_1SQU.pdb: