Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLYSLVKKYLFSLDAEIAHEKVCQILRTLSSSPFLCRLIHSQWGYKNPKLENEILGLNFPNPLGLAAGFDKNASMLRALIAFGFGYLEAGTLTNIAQSGNEKPRLFRHIEEESLQNAMGFNNYGAIL---GVRAFNRFAPYKT----PIGINLGKNKHIEQAHALEDYQAVLNQCLNIGDYYTFNLSSPNTPNLRDLQNKVFVNELFCM------AKEMTHKP-LFLKIAPDLEIDSMLEVVNSAIEAGANGIIATNTTIDKSLVFA---PKEMGGLSGKCLTKKSREIFKELAKAFFNKSVLVSVGGISDAKEAYERIKMGASLLQIYSAFIYKGPNLCQNILKDLVKLLQKDGFLSVKEAIGADLR |
1UUM Chain:B ((55-371)) | -------------------------------------------------LEVKVLGHKFRNPVGIAAGFDKNGEAVDGLYKLGFGFVEVGSVTPQPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRARQQKQAQLTADGLPLGINLGKNKTSEDAAA--DYAEGVRTLGPLADYLVVNVSS---------QGKTELRHLLSKVLQERDALKGTRKPAVLVKIAPDLTAQDKEDIASVARELGIDGLIVTNTTVSRPVGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRIPIIGVGGVSSGQDALEKIQAGASLVQLYTALIFLGPPVVVRVKRELEALLKERGFTTVTDAIGADHR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UUM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128929 for 2536 contacts (-50.8/contact) +
2D Compatibility (PS) -30967 + (NN) -9748 + (LL) 4308
1D Compatibility (HY) -15600 + (ID) 5900
Total energy: -186836.0 ( -73.67 by residue)
QMean score : 0.427
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