Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIAQNAPFDLFISADIARPKKLYD-EKITPFKEEVYAKGVLVL-WSENL-KMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLKLTPSLK--SKIIYGASISQAHQFIATKNAQIGFGALSLIDK-K--DKNLSYFIIDKTLYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD
1ATG Chain:A ((1-230))----------------------ELKVVTATNFLGTLEQLAGQFAKQ-TGHAVVISSGSSGPVYAQIVNGAPYNVFFSADEKSPEKLDNQGFALPGSRFTYAIGKLVLWSAKPGLVDNQGKVLAGNGWRHIAISNPQIAPYGLAGTQVLTHLGLLDKLTAQERIVEANSVGQAHSQTASGAADLGFVALAQIIQAAAKIPGSHWFPPANY-YEPIVQQAVITKSTAEKANAEQFMSWMKGPKAVAIIKAAGYVLP


General information:
TITO was launched using:
RESULT:

Template: 1ATG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126816 for 1951 contacts (-65.0/contact) +
2D Compatibility (PS) -23256 + (NN) -6769 + (LL) 2836
1D Compatibility (HY) -11200 + (ID) 4000
Total energy: -169205.0 ( -86.73 by residue)
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_1ATG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ATG-query.scw
PDB file : Tito_Scwrl_1ATG.pdb: