Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLIVTRFAPSPTGYLHIGGLRTAIFNYLFARANQGKFFLRIEDTDLSRNSIEAANAIVEAFKWVGLEHD-GEIL-------YQSKRFEIYKEYIQKLLDEDKAYYCYMSKEELDALREEQKARKETPRYDNRYRDFKGTPP-----KGIEPVVRIKVPQNEVIGFNDGVKGEVKVNTNEID-DFIIARSDGTPTYNFVVTIDDALMGITDVIRGDDHLSNTPKQIVLYKALNFKIPNFFHVPMILNEEGQKLSKRHGATNVMDYQEMGYLKEALVNFLARLGWSYQDK-EVFSMQELLEWFNPKDLNSSPSCFSWHKLNWLNAHYLKNQSVQELLKLLKPFSFSDLSHLN-PAQLDR------LLDALKERSQTLKELALKIDEVLTAPIE---YEEKVFKKLNQALVMPLLEKFKLALDKTDFNDESALEN--AMHQIIEEEKIKAGHFMQPLRLALLGKGGGIGLKEALFILGKAESIKRI---EEFLKN |
4GRI Chain:B ((27-509)) | -----VRYAPSPTGLQHIGGIRTALFNYFFAKSCGGKFLLRIEDTDQSRYSPEAENDLYSSLKWLGISFDEGPVVGGDYAPYVQSQRSAIYKQYAKYLIESGHAYYCYCSPERLERIKKIQNINKMPPGYDRHCRNLSNEEVENALIKKIKPVVRFKIPLEGDTSFDDILLGRITWANKDISPDPVILKSDGLPTYHLANVVDDYLMKITHVLRAQEWVSSGPLHVLLYKAFKWKPPIYCHLPMVMGNDGQKLSKRHGSTALRQFIEDGYLPEAIINYVTLLGWSYDDKREFFSKNDLEQFFSIEKINKSPAIFDYHKLDFFNSYYIREKKDEDLFNLLLPF-FQKKGYVSKPSTLEENQKLKLLIPLIKSRIKKLSD-ALNMTKFFYEDIKSWNLDEFLSRKKTAKEVCSILELIKPILE--GFEKRSSEENDKIFYDFAESN---LGEILLPIRIAALGSKVSPPLFDSLKLIGKSKVFERIKLAQEFLRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GRI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191571 for 3368 contacts (-56.9/contact) +
2D Compatibility (PS) -48479 + (NN) -16965 + (LL) 1348
1D Compatibility (HY) -44400 + (ID) 9050
Total energy: -309117.0 ( -91.78 by residue)
QMean score : 0.566
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