Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFFHKKIILNFIYSLMVAFLFHLSYGVLLKADGMAKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIVFTRKERTLLLSLQTSPYQDIVKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRLHQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHPVLKVKRPHYGVDYAAKHGSLIHSASDGRVGFIGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQYSKQKLEELFKTHSFEKNSFYLLEGF
4RNY Chain:B ((2-363))--------------------------------------------ERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRFHPVLKVRRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNELRLVYAHMSAFANGLKKGSFVKKGQIIGRVG----STGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGF


General information:
TITO was launched using:
RESULT:

Template: 4RNY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189404 for 2780 contacts (-68.1/contact) +
2D Compatibility (PS) -38408 + (NN) -14310 + (LL) 4568
1D Compatibility (HY) -50800 + (ID) 17400
Total energy: -305754.0 ( -109.98 by residue)
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_4RNY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RNY-query.scw
PDB file : Tito_Scwrl_4RNY.pdb: