Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLLIGLLLMSFISLQSASWQEPLRVSIEFVDLPKKIIRFPAHDLKVGEFGFVVTKLSDYEIVNSEVVIIAVENGVATAKFKAFESMKQSHLPTPRMVAKKGDLVYFRQFN--NQAFLIAPNDELYEQIRATNTDINFISSDLLVTFL-NGFD-PKIANLRKACNVYSVGVIYIVTTNTLNILSCESFEILEKRELDTSGVTKTSTPFFSRVEGIDAGTLGKLFSGSQSKNYFAYYDALVKKEKRKEVRIEKKEERIDARENKREIKQEAIKEPKKANQGTENAPTLEEKNYQKAERKFDAKEERRRSRDERKKTKATKKAMEFEEREKEHDERDEKETEERRKALEMDKGNEKVNAKENEREINQESANEPSSENNATLKDTENTSVLKESAAKKEAPKPSSKEEKRRLKEEKKKAKAEQRAREFEQRAREHQERDEKELEERRKALEMNKK |
| 3HRG Chain:A ((102-192)) | ----------------------------------------------------------------------------------------------------RENEIVMYNILKKNNVVIIFGIDKSTYTFLNEQYPEARFYSQ--STPLIEYFSIKSRLGNSKKMYASVRKDAIDIYCFERGQLLLANSFECMQTEDRIYYLLYVWKQLEFNQERDELHLTGTLSDKETLMNELKKFILQVFIMNPANNIDMQALLTCE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HRG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43193 for 479 contacts (-90.2/contact) +
2D Compatibility (PS) -9597 + (NN) -2020 + (LL) 21544
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -39116.0 ( -81.66 by residue)
QMean score : 0.406
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