Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELGFNEAERQKILDSNSSLIRNANEVRDKFIQNYAISLKDSNDPQDFLRRVQELRINMQKNFISFDTYYNYLNNLVLASYNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRKLNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE |
| 1AVO Chain:B ((127-188)) | --------------------------------------------------------------------------------------------------------------------------QLNLVTTWL-QLQIPRIEDGNNFGVAVQEKVFE----LMTSL---HTKLEGFHTQISKYF--SERGDAVTKA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AVO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12907 for 276 contacts (-46.8/contact) +
2D Compatibility (PS) -6613 + (NN) -2124 + (LL) 9160
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -14434.0 ( -52.30 by residue)
QMean score : 0.202
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