Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------MSNNMR-KLFSMIANSKDK--KEKLIESLQENELLNTDEKKKIIDQIK---TMHDFFKQMHTNKGALDKVLRNYMKD--------------------------YRAVIKSIGVDKFKKVY----RLLESETMELLHAIAENPNFLFSKFDRS-------ILGIFLPFFSKPIMFKMSIREMDSQIE-----LYGTKLPPLKLFVMTDEEVNFYANLKTI---------EQYNDYVRDLLMKFDLEKYMEEKGVQNA |
| 2QQ8 Chain:A ((15-326)) | YFQGNAVLTWNNEILPNWEWCSRKVRDLWWQGIPPSVRGKVWSLAIGNELNITHELFDICLARAKERWEASLELIKLDISRTFPNLCIFQQGGPYHDMLHSILGAYTCYRPDVGYVQGMSFIAAVLILNLDTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAHFKKNNLTPDIYLIDWIFTLYSKSLPLDLACRIWDVFCRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLPEDLPAEELFASIATIQMQSRNKKWAQVLTALQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7202 for 1317 contacts (-5.5/contact) +
2D Compatibility (PS) -21412 + (NN) -11066 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 1700
Total energy: -53780.0 ( -40.84 by residue)
QMean score : 0.218
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