Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINNNNNNKKLRGFFLKVLLSLVVFSSYGSAN-DDKEAK--KEALEKEKNTPNGLVYTNLDFDSFKATIKNLKDKKVTFKEVNPDIIKDEVFDFVIVNRVLKKIKDLKHYDPVIEKIFDEKGKEMGLNVELQINPEVKDFFTFKSISTTNKQRCFLSLHGETREILCDDKLYNVLLAVFNSYDPNDLLKHISTIESLKKIFYTITCEAVYL |
| 1HH4 Chain:B ((77-135)) | -------------------VSLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKRKRKC------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HH4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2191 for 288 contacts (7.6/contact) +
2D Compatibility (PS) -6174 + (NN) -2326 + (LL) 6852
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -4657.0 ( -16.17 by residue)
QMean score : 0.576
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