Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL
4B1F Chain:B ((1-255))
MKIGVFDSGVGGFSVLKSLLKARLFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVEDKNAPILVLGTKATIQSNAYDNALKQQGYLNISHLATSLFVPLIEESILEGELLETCMHYYFTPLEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNACTFPKVEFHASGDVIWLERQAKEWLKL
General information:
TITO was launched using:
RESULT:
Template:
4B1F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -263709 for 2255 contacts (-116.9/contact) +
2D Compatibility (PS) -27102 + (NN) -11047 + (LL) 0
1D Compatibility (HY) -42000 + (ID) 12750
Total energy: -356608.0 ( -158.14 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_4B1F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B1F-query.scw
PDB file :
Tito_Scwrl_4B1F.pdb
: