Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALFEDIQAVIAEQLNVDAAQVTPEAEFVKDLGADSLDVVELIMALEEKFNIEIPDEQAEKIVNVGDVVKYIEDNKLA
3GZM Chain:B ((5-78))
-STFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKNNKQ
General information:
TITO was launched using:
RESULT:
Template:
3GZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52289 for 495 contacts (-105.6/contact) +
2D Compatibility (PS) -7972 + (NN) -2870 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 2000
Total energy: -72923.0 ( -147.32 by residue)
QMean score : 0.836
(partial model without unconserved sides chains):
PDB file :
Tito_3GZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZM-query.scw
PDB file :
Tito_Scwrl_3GZM.pdb
: