Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKRAKTKAQQIKELLLKHYPNQTTELRHKNPYELLVATILSAQCTDARVNQITPKLFEKYPSVNDLALASLEEVKEIIQSVSYSNNKSKHLISMGAKVVKDFKGVIPSTQKELMSLDGVGQKTANVVLSVCFDANYIAVDTHVFRTTHRLGLSNANTPIKTEEELSDLF-KDNLSKLHHALILFGRYTCKAKNPLCDACFLKEFCVSKASFKA
2ABK Chain:A ((3-209))
------KAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
General information:
TITO was launched using:
RESULT:
Template:
2ABK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123168 for 1608 contacts (-76.6/contact) +
2D Compatibility (PS) -21475 + (NN) -7831 + (LL) 664
1D Compatibility (HY) -12400 + (ID) 3750
Total energy: -167960.0 ( -104.45 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2ABK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ABK-query.scw
PDB file :
Tito_Scwrl_2ABK.pdb
: