Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETPKVLLKNLQDCKIHFIGIGGIGISGLAKYLKAQGAKISGSDIAISPSVKYLKALGVEINIPHDPKAINHQDVIIHSAIIKEDNTEIQRAKELEIPILSRKDALYSILKDKRVFSVCGAHGKSSITAMLSAIC------PAFGAIIGAHSKEFDSNVRESADMSLVFEADESDSSFLFSNPFCAIVPNTEPEHLEHYDHDLERFFFAYKYFLDHAQ---KRVIYKEDPFL----KNYSKDAIVL---EKKDIYNIQYILKDG--EPYTSFELKNLGAFLVWGL-GEHNATNASLAILSALDE-LNLEEIRNNLLNFKGIKKRFD-----ILQKNNLILIDDYAHHPTEIGATLKSARIYANLLNTQEKIIVIWQAHKYSRLMDNLEEFKKCFLEHCDRLIILPVYSASEVK-RDIDLKA------HFKHYNPTFIDRVRKKGDFLELLVNDNVVETIEKGFVIGFGAGDITYQLRGEM |
1GQY Chain:B ((7-468)) | --EIRKIIPEMRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKDDNPELVTSKQKRIPVIQRAQMLAEIMRFRHGIAVAGTHGKTTTTAMISMIYTQAKLDPTF--VNGGLVKSAGKNAHLGASRYLIAEADESDASFLHLQPMVSVVTNMEPDHMDTYEGDFEKMKATYVKFLHNLPFYGLAVMCADDPVLMELVPKVGRQVITYGFSEQAD-YRIEDYEQTGFQGHYTVICPNNERINVLLNVPGKHNALNATAALAVAKEEGIANEAILEALADFQGAGRRFDQLGEFIRPNGKVRLVDDYGHHPTEVGVTIKAAREGWG----DKRIVMIFQPHRYSRTRDLFDDFVQV-LSQVDALIMLDVYAAGEAPIVGADSKSLCRSIRNLGKVDPILVSDTSQLGDVLDQIIQDG-------DLILAQGAGSVSKISRGLA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211482 for 3620 contacts (-58.4/contact) +
2D Compatibility (PS) -46339 + (NN) -8525 + (LL) 1928
1D Compatibility (HY) -23600 + (ID) 7750
Total energy: -295768.0 ( -81.70 by residue)
QMean score : 0.468
|
|
|