Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVAVYTSPIDLAAKVDLVFTMLSDKAAIDAVL--APKFWEQMSK-KIVVNMSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVLAHLGSQTFYLGKVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKKGMWLQDNYPAAFSLKLMAKDIRLAKNEAGEAMKLPF--LFQAEELYSQAEKSGLGGLDMAAVYHYLEKGEH |
| 3PDU Chain:H ((5-286)) | ---GFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAV-ELGDRLGQPLHGAATANESFKRARAAGHADEDFAAVFRVLEA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178403 for 2439 contacts (-73.1/contact) +
2D Compatibility (PS) -30635 + (NN) -14517 + (LL) 392
1D Compatibility (HY) -20800 + (ID) 5150
Total energy: -249113.0 ( -102.14 by residue)
QMean score : 0.471
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