Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVRFFGPIKEE----N--FFIKANGLKELRAILQ-EKEGLKEWL--GVCAIALNDHLIDNLDMPLKDGDVISLLPPVCGG
1FM0 Chain:D ((1-81))
MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWALALEDGKLLAAVNQTLVS-FDHPLTDGDEVAFFPPVTGG
General information:
TITO was launched using:
RESULT:
Template:
1FM0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58959 for 453 contacts (-130.2/contact) +
2D Compatibility (PS) -8161 + (NN) -2648 + (LL) -80
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -76198.0 ( -168.21 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_1FM0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FM0-query.scw
PDB file :
Tito_Scwrl_1FM0.pdb
: