Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S0Y Chain:B ((29-188))
--------------------------------------------------------------------------------------------NTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFNP-----
General information:
TITO was launched using:
RESULT:
Template:
3S0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65350 for 1149 contacts (-56.9/contact) +
2D Compatibility (PS) -17856 + (NN) -14328 + (LL) 7252
1D Compatibility (HY) -20400 + (ID) 7700
Total energy: -118382.0 ( -103.03 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_3S0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S0Y-query.scw
PDB file :
Tito_Scwrl_3S0Y.pdb
: