Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTIKKG--VALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
4BA7 Chain:B ((4-106))
----IEINDENFEEEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAEEYEGKVKFAKVNVDENPETAAKYGIMSIPTLLLFKNGEVVDKLVGARPKEALKERIEKHL-
General information:
TITO was launched using:
RESULT:
Template:
4BA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69625 for 746 contacts (-93.3/contact) +
2D Compatibility (PS) -10669 + (NN) -2465 + (LL) 144
1D Compatibility (HY) -10400 + (ID) 3100
Total energy: -96115.0 ( -128.84 by residue)
QMean score : 0.713
(partial model without unconserved sides chains):
PDB file :
Tito_4BA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BA7-query.scw
PDB file :
Tito_Scwrl_4BA7.pdb
: