Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKAVFINVWYLLLTIILLIIIWRIIKLVLKDKNDSGDKGLG
2KV5 Chain:A ((1-33))
-----MKDLMSLVIAPIFVGLVLEMISRVLDEEDDSRK----
General information:
TITO was launched using:
RESULT:
Template:
2KV5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14723 for 126 contacts (-116.8/contact) +
2D Compatibility (PS) -3616 + (NN) -3233 + (LL) 712
1D Compatibility (HY) -4400 + (ID) 350
Total energy: -25610.0 ( -203.25 by residue)
QMean score : 0.706
(partial model without unconserved sides chains):
PDB file :
Tito_2KV5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KV5-query.scw
PDB file :
Tito_Scwrl_2KV5.pdb
: