Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDGEMIGYTEELLTFLVRDF-----FNGIFKSKVIPKMPIFCGDVKCEDFNALRSLVYLSVLELEETINPNKIPF
2LW6 Chain:A ((19-98))
SFVQCNHHLLYNGRHWGTIRKKAGWAVRFYEEKPGQPKRLVAICKNASPVHCNYLKCTNLAAG-----FSAGTSTDVLSSGTVGS
General information:
TITO was launched using:
RESULT:
Template:
2LW6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15863 for 528 contacts (-30.0/contact) +
2D Compatibility (PS) -7610 + (NN) 1671 + (LL) 532
1D Compatibility (HY) -800 + (ID) 500
Total energy: -22570.0 ( -42.75 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_2LW6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LW6-query.scw
PDB file :
Tito_Scwrl_2LW6.pdb
: