Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDSKKPHYRVSLSEQALNHEKLMRAIVKNLADTPMVLKGETALYLGYGLNRFSEDLDFDCHKKINLLGRVKSAIPNGIILNDIHIKKDTDSVGRYMVRYATKDNKEEQTLKLEISYRDAPKESEVNVIEGMRIAKIERIIDNKLCACFDGEHTRTKARDLFDLHFLAKHYEEHFNLDLASRLKDFSKDPDKLVSDYLVDVKLDALLNQI-MDLEETALELGVMAQLIHKKLEKQSHSLNALQEQQGYSNNDNSLDNSNENTYTPKRRR |
1UMQ Chain:A ((22-81)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAKGESLPPPPENPMSADRVRWEHIQRIYEMCDRNVSETARRLNMHRRTLQRILAKRSPR------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13300 for 315 contacts (-42.2/contact) +
2D Compatibility (PS) -6389 + (NN) -3919 + (LL) 13108
1D Compatibility (HY) -800 + (ID) 500
Total energy: -11800.0 ( -37.46 by residue)
QMean score : 0.422
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