Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNFFDTLMGMFVEPSQKVAKSLAE---------HVGSFFHAQLILNTIITILFMIWAYKRVKEGDMFE------FKTAMGVVVFIAFVGF------INWGIKNPNDFNTYFIN----------TIFYPSEKLAILIAQSLNDGLEIPTNTNLSPSEIFSIGNLASSAYAMIVNLWDNAFDGINMFNWLTMIPK--------IIMFFLVILGELLFLGLLLI-------IVLLVTAEIFMWSALGLI------------VLPLGLIPQTKGMLFSYLKKLISLTLYKPCMMLVAFFNYGIIYK--VNTLIPTKHEVTQGFYGNADKMA--------------------------NEGKIIDVFGNVLKGDWNSYIAHSSIVGFLTIIVLGSVICFFLVKRVPDFINNIFG--------------TSGGVGAVTEMMQKIGMTIGGAVFGG-------------------------SAVMVANQVKQAYQSAGG-GLAGLQAGAKAFG-------LGAISGGASAMANHRSVKAGVKHF--VASVKSGFGFDNDKNNK------------- |
| 2O1U Chain:A ((34-661)) | MMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTVGFYSAFLVADKVIVTSKHNNDTQHIWESDSNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKVWDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPRYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYNDTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -295916 for 2729 contacts (-108.4/contact) +
2D Compatibility (PS) -43890 + (NN) 4738 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -345668.0 ( -126.66 by residue)
QMean score : 0.113
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