Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISKFLLKSMFKQWKNGDYQVVFWDNSVYRNGEHSPKFTLKIHRPLKFSDIKKDMSLTIAEAYMDGVIDIEGSMDEVMHSLYLQTNYEHLHKHDSAKAVQKPLKESSNISKHYDLGNDFYSIWLDETLSYSCAYFKKDDDTLHAAQLQKLDHTLKKLHLKQGEKLLDIGCGWGYLSIKAAQEYGAEVMGITISSEQYKQANKRVQELGLEDKVTIKLLNYQDLDGRLYRFDKVVSVGMFEHVGKDNLPFYFKKVKEVLKRGGMFLLHSIL--CCFEGKTNA------WVDKYIFPGGYLPSLREVMSVMSECDFHLLMAESLRIHYAKTLDIWRDNFNHNLDQVKRLGYDERFIRMWDLYLRTCASAFRVGSADLFQLLLTNSVDNTFPLTKEYIYQ |
| 1L1E Chain:B ((16-285)) | ----------------------------------------------------------------------------------------------------------------YDLSDDFFRLFLDPTQTYSCAYFERDDMTLQEAQIAKIDLALGKLNLEPGMTLLDIGCGWGATMRRAIEKYDVNVVGLTLSENQAGHVQKMFDQMDTPRSRRVLLEGWEKFDEPV---DRIVSIGAFEHFGHQRYHHFFEVTHRTLPADGKMLLHTIVRPTFK------LVHFTKFILAEIFPGGWLPSIPTVHEYAEKVGFRVTAVQSLQLHYARTLDMWATALEANKDQAIAIQSQTVYDRYMK-YLTGCAKLFRQGYTDVDQFTLEK--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166031 for 2060 contacts (-80.6/contact) +
2D Compatibility (PS) -26426 + (NN) -2259 + (LL) 8960
1D Compatibility (HY) -20800 + (ID) 4700
Total energy: -211256.0 ( -102.55 by residue)
QMean score : 0.460
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