Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKATALSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYEWAKKEGLGSVDYYINELVHKKA
3CEI Chain:B ((1-210))
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPKATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYEWAKKEGLGSVDYYINELVH---
General information:
TITO was launched using:
RESULT:
Template:
3CEI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131596 for 1713 contacts (-76.8/contact) +
2D Compatibility (PS) -21585 + (NN) -3858 + (LL) 272
1D Compatibility (HY) -30800 + (ID) 10400
Total energy: -197967.0 ( -115.57 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3CEI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CEI-query.scw
PDB file :
Tito_Scwrl_3CEI.pdb
: