Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHILVSGATSGFGLEIAKAFLQKNHVVFGTGRRQENLQKLQLAYPKRFIPLCFDLQNKPETKRAIETIFSMTDRIDALINNAGLALGLNKAYECELDDWEVMIDTNIKGLLHLTRLILPSMIEHDQGTIINLGSIAGTYAYPGGNVYGASKAFVKQFSLNLRADLAGTNIRVSNVEPGLCGETEFSMVRFKGDKIKAQSVYENTLYLKPQDIANIVLWIYEQPSHVNINRIEIMPTSQTFAPLPTHKNP
3ASV Chain:F ((3-247))
---VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPVTQSYAGLNVHRQ-
General information:
TITO was launched using:
RESULT:
Template:
3ASV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121941 for 1996 contacts (-61.1/contact) +
2D Compatibility (PS) -26089 + (NN) -7016 + (LL) 316
1D Compatibility (HY) -20800 + (ID) 6200
Total energy: -181730.0 ( -91.05 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_3ASV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASV-query.scw
PDB file :
Tito_Scwrl_3ASV.pdb
: