Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKEEPKQEP-APVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKEN-HMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGESKPKCVQKTRECYRENRRVDVKLVK |
4B5C Chain:C ((20-134)) | ---------------------------------------------------DPLNDPNSPLAKR-----------SVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKRAEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLVYQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5334 for 830 contacts (6.4/contact) +
2D Compatibility (PS) -12023 + (NN) -7340 + (LL) 4516
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -16063.0 ( -19.35 by residue)
QMean score : 0.447
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