Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFPLEAIPH---TPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDKGEQRQKEGELIKAFDLPLSLIERTQEC
1XM5 Chain:D ((54-124))
------------------------------------------LNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIA---
General information:
TITO was launched using:
RESULT:
Template:
1XM5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28846 for 393 contacts (-73.4/contact) +
2D Compatibility (PS) -7644 + (NN) -4477 + (LL) 4304
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -43363.0 ( -110.34 by residue)
QMean score : 0.506
(partial model without unconserved sides chains):
PDB file :
Tito_1XM5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XM5-query.scw
PDB file :
Tito_Scwrl_1XM5.pdb
: