Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVIVALGVLAFANVLMATDVKALVKGCAACHGVKFEKKALGKSKIVNMMSEKEIEEDLMAFKSGANKN---PVMTAQAKKLSDEDIKALAKYIPTLK
2ZZS Chain:Z ((34-102))
----------------------------CAACHGADGNATIPGYPNLKGQ-NEQYIVSSIKAYKNKERSGGLAAVMQAQASLLSDDDIANLAAYYSSL-
General information:
TITO was launched using:
RESULT:
Template:
2ZZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5781 for 409 contacts (-14.1/contact) +
2D Compatibility (PS) -7241 + (NN) -3785 + (LL) 3408
1D Compatibility (HY) -3200 + (ID) 1250
Total energy: -17849.0 ( -43.64 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_2ZZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZZS-query.scw
PDB file :
Tito_Scwrl_2ZZS.pdb
: