Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTEMKSFLKLFAQPLLVVLAFMLLYALAHAVLGFYVKKDSAPMSPNVEKSETERQNSTFSPKEEANATTTATEQNPTKDTVPPLDTATQKQEIKQEIKQEIKQEIKQEIKQEIKQEIKQETKQEQEKENKPKQNSVSPVQNDQKTPTTPLMGKKPLEYKVAVSGVNVRAFPSTKGKIIGSLIKNKSVKVLEIQNDWAEIEFSHETKGYVFLKLLKKAE |
| 3NPF Chain:A ((86-141)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------IVVTSHYGFAYEKPDESSQPVSDVVAGNRLKWEGSKGHFYQVSYPDGRKAYLSKSISQPEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NPF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22423 for 363 contacts (-61.8/contact) +
2D Compatibility (PS) -5662 + (NN) 3209 + (LL) 11700
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -15026.0 ( -41.39 by residue)
QMean score : 0.366
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