Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKKRVFSGIQPTGQIHLGNYLGAIKHWVELQDEYENLFCIVNSHAITLPIEPIFLKSQTYELVKLLLACGISPKQSGLFIQSEVDEHPALAWLLDCQVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILLYQSDLVPVGEDQKQHLELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEPDVIVKKIKKAATDSMGVIAFDETREGVFNLLNIYMLLSDESPEKIEERFRNKGYGDFKKELAEVVIQSLKPIQERYQE-ISDDEVKAVLNCGAEKARPLARATYQKAKELMGLI |
3FHJ Chain:F ((2-324)) | ---KTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERM-------------VSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRY---FTIPEAR------RIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKS----SEGTIRY----PGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167935 for 2311 contacts (-72.7/contact) +
2D Compatibility (PS) -30930 + (NN) -13774 + (LL) 1600
1D Compatibility (HY) -29600 + (ID) 7750
Total energy: -248389.0 ( -107.48 by residue)
QMean score : 0.535
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