Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKDILNALYHQKDLNDEEVKKLFTLIIDEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPF-NSGLDLIDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSH-SGSADLLENLGVNIEMNPMQLENCFKQSHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGPLINPLRPKIQLLGVYDKSLCKTMALALKALGVKRAMVVNGGGTDEIVLHDITHACELKNNEILEYDLSAKDFDLPPYDLKELQIENAKESVQACLDILENKGKDSHTMVVAANVASLLYLSHRAKDLKEGVSMTLEHLKTKAPYAHLQKIIRLSHA |
1KGZ Chain:B ((14-335)) | -QPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADA-QPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSV---LAGSCDLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQ-DNLRHNAQLALETIRSGTAFERVTALAAR--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209808 for 2847 contacts (-73.7/contact) +
2D Compatibility (PS) -33692 + (NN) -19524 + (LL) 564
1D Compatibility (HY) -22800 + (ID) 6700
Total energy: -291960.0 ( -102.55 by residue)
QMean score : 0.596
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