Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKYTELKDKSIKELEELLHAKKAELFELRVKLKNMQLS-NPNEIKKARRNIARINTAINAYYSSSVE
3GHG Chain:L ((32-75))
--YQTKVDKDLQSLEDILHQVENKTSEVKQLIKAIQLTYNPDESSKPNMIDAATLKSRKMLEEIMKY
General information:
TITO was launched using:
RESULT:
Template:
3GHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5299 for 159 contacts (33.3/contact) +
2D Compatibility (PS) -4938 + (NN) -7062 + (LL) 272
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -8779.0 ( -55.21 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_3GHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GHG-query.scw
PDB file :
Tito_Scwrl_3GHG.pdb
: