Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA |
4J7Z Chain:F ((4-54)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDYYAILGVPRNATQEEIKRAYKRLARQYHP------EAE----EKFKEINEAYAVLSDPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J7Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7883 for 254 contacts (-31.0/contact) +
2D Compatibility (PS) -4893 + (NN) -3515 + (LL) 17312
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -2679.0 ( -10.55 by residue)
QMean score : 0.811
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