Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQGIIINEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRAIRPMKDGVIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVKEPQGSLIVDIGGGTTEIGVISLGGLVISKSIRVAGDKLDQSIVEYIRKKFNLLIGERTGEEIKIEIGCAIKLDPP-----LTMEVSGRDQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
4CZJ Chain:B ((5-326)) | ------------DIAIDLGTANTLIYQKGKGIVLNEPSVVALR-NVGGRKV--VHAVGIEAKQMLGRTPGHMEAIRPMRDGVIADFEVAEEMIKYFIRKVHN------PKVIVCVPSGATAVERRAINDSCLNAGARRVGLIDEPMAAAIGAGLPIHEPTGSMVVDIGGGTTEVAVLSLSGIVYSRSVRVGGDKMDEAIISYMRRHHNLLIGETTAERIKKEIGTA---RAPADGEGLSIDVKGRDLMQGVPREVRISEKQAADALAEPVGQIVEAVKVALEATPPELASDIADKGIMLTGGGALLRGLDAEIRDHTGLPVTVADDPLSCVALGCGKVLEH----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4CZJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212011 for 2766 contacts (-76.6/contact) +
2D Compatibility (PS) -34056 + (NN) -15242 + (LL) 3028
1D Compatibility (HY) -29200 + (ID) 8400
Total energy: -295881.0 ( -106.97 by residue)
QMean score : 0.624
|
|
|